GMOD
Tutorials from the world of the Generic Model Organism Database (GMOD)
GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.
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Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.JBrowse 1
Learn to use JBrowse v1 here.
MAKER
Genome Annotation with MAKER.
Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
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Genome annotation with Maker (short) | |||||
Genome annotation with Maker |
InterMine
InterMine is a data warehouse you can query for interesting features and data.
Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
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InterMine integration with Galaxy |
Apollo v2
Apollo is a collaborative, real time genome annotation editor.
Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
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Refining Genome Annotations with Apollo (prokaryotes) | |||||
Refining Genome Annotations with Apollo (eukaryotes) |
Editorial Board
This material is reviewed by our Editorial Board:
Helena Rasche Anthony BretaudeauContributors
This material was contributed to by:
Anna Syme Bazante Sanders Bérénice Batut Mateo Boudet Jonathan Kreplak Robert Meller Torsten Seemann Yo Yehudi Laura Leroi Miaomiao Zhou Simon Gladman Frederick Tan Delphine Lariviere Daniela Butano Alexandre Cormier Elizabeth Humphries Cristóbal Gallardo Deepti Varshney Erwan Corre Jasper Ouwerkerk Nathan Dunn Stéphanie Robin Helena Rasche Björn Grüning Katherine Cox Teresa Müller Simon Bray Anton Nekrutenko Ava Hoffman Natalie Kucher Anthony Bretaudeau Paul Zierep Saskia Hiltemann Candace SavonenFunding
These individuals or organisations provided funding support for the development of this resource