Porechop: adapter trimmer for Oxford Nanopore reads

toolshed.g2.bx.psu.edu/repos/iuc/porechop/porechop/0.2.4+galaxy00.2.4+galaxy0

Metadata

Servers Offering this Tool

UseGalaxy.eu (0.2.4+galaxy0)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

0.2.4+galaxy0
0.2.4
0.2.3

EDAM Operations

EDAM Topics

Relevant Tutorials

Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
Microbiome / Identification of the micro-organisms in a beer using Nanopore sequencing
Microbiome / 16S Microbial analysis with Nanopore data
Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition