featureCounts: Measure gene expression in RNA-Seq experiments from SAM or BAM files

Metadata

Servers Offering this Tool

UseGalaxy.eu (2.0.3+galaxy2)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

• 2.0.3+galaxy2
• 2.0.3+galaxy1
• 2.0.1+galaxy2
• 2.0.1
• 1.6.4+galaxy1
• 1.6.3
• 1.6.2

EDAM Operations

• operation_3793

EDAM Topics

• topic_3168

Relevant Tutorials

• Single Cell / Pre-processing of Single-Cell RNA Data
• Transcriptomics / De novo transcriptome reconstruction with RNA-Seq
• Transcriptomics / Pathway analysis with the MINERVA Platform
• Transcriptomics / Reference-based RNA-Seq data analysis
• Transcriptomics / 1: RNA-Seq reads to counts