Bowtie2: - map reads against reference genome

toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.5.0+galaxy02.5.0+galaxy0

Metadata

Servers Offering this Tool

UseGalaxy.eu (2.5.0+galaxy0)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

2.5.0+galaxy0
2.4.5+galaxy1
2.4.2+galaxy0
2.3.4.3+galaxy0
2.3.4.3
2.3.2.2

EDAM Operations

operation_3198

EDAM Topics

Relevant Tutorials

Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
Assembly / Assembly of metagenomic sequencing data
Contributing to the Galaxy Training Material / Creating a new tutorial
Epigenetics / ATAC-Seq data analysis
Epigenetics / CUT&RUN data analysis
Epigenetics / Identification of the binding sites of the Estrogen receptor
Epigenetics / Formation of the Super-Structures on the Inactive X
Genome Annotation / Identification of AMR genes in an assembled bacterial genome
Microbiome / Assembly of metagenomic sequencing data
Sequence analysis / Mapping