MuSiC Deconvolution: estimate cell type proportions in bulk RNA-seq data

Metadata

Links

• bio.tools: MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC

EDAM Operations

• Design
• Protein property calculation
• Variant effect prediction

EDAM Topics

• Genetic variation
• Computational biology
• Protein properties
• Protein folding, stability and design
• Bioengineering

Observed Tool Versions

Within GTN tutorials

0.1.1+galaxy4

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

Relevant Tutorials

• Single Cell / Evaluating Reference Data for Bulk RNA Deconvolution
• Single Cell / Bulk RNA Deconvolution with MuSiC